UCSF ChimeraX
Next-generation molecular visualization.
Overview
UCSF ChimeraX is the next-generation molecular visualization program from the RBVI lab at UC San Francisco, succeeding the widely used UCSF Chimera. It is designed for the visualization and analysis of molecular structures, density maps, 3D microscopy data, and sequence alignments. It features high-performance rendering and a modern, extensible software framework.
β¨ Key Features
- High-quality molecular graphics and rendering
- Analysis of molecular structures and properties
- Visualization of volumetric data (cryo-EM maps, etc.)
- Sequence alignment viewing
- Structure building and editing
- Extensible via Python API and toolshed
π― Key Differentiators
- Excellent performance with very large datasets (e.g., large cryo-EM maps).
- Modern user interface and command-line integration.
- Free for non-commercial use and actively developed.
Unique Value: Provides cutting-edge, high-performance visualization and analysis of complex molecular and microscopy data, free for academic use.
π― Use Cases (5)
β Best For
- Extensively used in academia for structural biology research and education.
- Utilized by pharmaceutical companies for visualizing protein-ligand interactions.
π‘ Check With Vendor
Verify these considerations match your specific requirements:
- NGS data analysis
- Mass spectrometry data processing
- Laboratory Information Management (LIMS)
π Alternatives
Offers superior performance on large datasets and a more modern architecture compared to its predecessor (Chimera) and some commercial alternatives.
π» Platforms
β Offline Mode Available
π Integrations
π Support Options
- β Email Support
- β Dedicated Support (None tier)
π° Pricing
Free tier: Free for academic, government, non-profit, and personal use.
π Similar Tools in Protein Analysis
Benchling
A cloud platform for life sciences R&D, offering tools for experiment design, data tracking, and sam...
Dotmatics
Provides an end-to-end R&D platform for managing scientific data and workflows across various discip...
QIAGEN CLC Genomics Workbench
A desktop software for analyzing and visualizing Next Generation Sequencing (NGS) data....
Thermo Fisher Proteome Discoverer
Comprehensive software for analyzing mass spectrometry-based proteomics data....
SchrΓΆdinger Maestro
A comprehensive molecular modeling and drug design software suite....
MOE (Molecular Operating Environment)
An integrated software platform for life sciences research including drug discovery, biologics, and ...